Libyan rebels, now running the country, have been flying the Al Qaeda flag.
Also, a former member of Al Qaeda has been appointed commander of the Tripoli Military Council. I don’t know exactly what that is, but it doesn’t sound good.
UPDATE: There is a video of a parade (reportedly in Benghazi, although I have no way of verifying that) filled with Al Qaeda flags. I certainly didn’t watch the whole 14-minute video, but I sampled it at random intervals and never failed to find plenty of them.